atram

Automated target restricted assembly method
https://github.com/juliema/aTRAM

Current versions
1.3.0
HEAD

atram requires the following formulae to be installed:
blast 2.6.0_2 Basic Local Alignment Search Tool
mafft 7.305 Multiple alignments with fast Fourier transforms
muscle 3.8.1551 Multiple sequence alignment program
trinity 2.5.1 RNA-Seq de novo assembler
velvet 1.2.10 Sequence assembler for very short reads

Recent formula history

ilovezfs atram 1.3.0
Shaun Jackman atram: update 1.04_2 bottle for Linuxbrew.
ilovezfs atram: move bottle block to correct location
ilovezfs atram: enable bottles
ilovezfs atram: sandbox-compliant test

Formula code at GitHub