Transcriptome assembly, differential expression analysis for RNA-Seq

Current version

Revision: 4

cufflinks requires the following formulae to be installed:
boost 1.67.0_1 Collection of portable C++ source libraries
samtools@0.1 0.1.20 Tools for manipulating next-generation sequencing data
eigen 3.3.4 C++ template library for linear algebra

Recent formula history

ilovezfs cufflinks: revision for boost
Michka Popoff cufflinks: revision for boost 1.65.1
tmozgach cufflinks: bump revision for boost
tmozgach cufflinks: Rename samtools-0.1 to samtools@0.1
ilovezfs cufflinks: rename boost@1.55 dependency (#5150)

Formula code at GitHub