orthofinder

Accurate inference of orthologous gene groups made easy
https://github.com/davidemms/OrthoFinder

Current versions
2.1.2
HEAD

orthofinder requires the following formulae to be installed:
blast 2.6.0_2 Basic Local Alignment Search Tool
mcl 14-137 Clustering algorithm for graphs
scipy 1.0.1 Software for mathematics, science, and engineering
fasttree 2.1.10 Approximately-maximum-likelihood phylogenetic trees
mafft 7.305 Multiple alignments with fast Fourier transforms

Recent formula history

ilovezfs orthofinder 2.1.2 (#6551)
ilovezfs orthofinder 1.1.10 (#6336)
ilovezfs orthofinder 1.1.8 (#5824)
ilovezfs orthofinder 1.1.4 (#5326)

Formula code at GitHub