Evaluates accuracy of a genome assembly using mapped paired end reads

Current versions

Revision: 2

reapr requires the following formulae to be installed:
bamtools 2.4.1_1 C++ API and command-line toolkit for BAM data
smalt 0.7.6_1 Aligns DNA sequencing reads with a reference genome

Reverse dependencies

The following formula requires reapr to be installed:
rampart 0.12.2 Configurable de novo assembly pipeline

Formula history

Colin Diesh reapr: update checksum of samtools patch (#5853)
ilovezfs reapr: revision for bamtools
ilovezfs reapr: fix build with Xcode 8 (#5273)
ilovezfs Revert "Use Ruby 1.9+ symbol hash keys in all formulae." (#4345)
JCount Use Ruby 1.9+ symbol hash keys in all formulae. (#4339)
ilovezfs reapr: use vendored samtools-0.1 to deconflict CI
ilovezfs reapr 1.0.18
Xu Cheng remove root_url in bottle block
Shaun Jackman reapr 1.0.17: Add DOI and tag bioinformatics
Ian Lancaster reapr: vend perl module dep
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