salmon

Transcript-level quantification from RNA-seq reads
https://github.com/COMBINE-lab/salmon

Current versions
0.8.2
HEAD

Revision: 1

salmon requires the following formulae to be installed:
autoconf 2.69 Automatic configure script builder
automake 1.15.1 Tool for generating GNU Standards-compliant Makefiles
cmake 3.10.1 Cross-platform make
boost 1.66.0 Collection of portable C++ source libraries
tbb 2018_U2 Rich and complete approach to parallelism in C++
xz 5.2.3 General-purpose data compression with high compression ratio
zlib 1.2.11 General-purpose lossless data-compression library

Recent formula history

ilovezfs salmon: revision for boost
romainstuder salmon 0.8.2
Shaun Jackman salmon: update 0.7.2 bottle for Linuxbrew.
Rob Patro salmon 0.7.2
Rob Patro salmon 0.7.1

Formula code at GitHub