trinity

RNA-Seq de novo assembler
https://trinityrnaseq.github.io

Current versions
2.4.0
HEAD

Revision: 2

trinity requires the following formulae to be installed:
express 1.5.1_9 Streaming quantification for sequencing
jellyfish 2.2.6 Fast, memory-efficient counting of DNA k-mers
trimmomatic 0.36 Flexible read trimming tool for Illumina data
samtools 1.5 Tools for manipulating next-generation sequencing data
gcc 7.2.0 GNU compiler collection

Formula history

ilovezfs trinity: fix checksum
Michka Popoff trinity: revision for boost
ilovezfs trinity: revision for gcc
ilovezfs trinity 2.4.0
ilovezfs trinity 2.3.2
ilovezfs Revert "Use Ruby 1.9+ symbol hash keys in all formulae." (#4345)
JCount Use Ruby 1.9+ symbol hash keys in all formulae. (#4339)
Shaun Jackman trinity: update 2.2.0_1 bottle for Linuxbrew.
ilovezfs trinity: revision for GCC 6
ilovezfs trinity: add undeclared dependency on gcc
Show all revisions of this formula