Package listing

This is a listing of all Homebrew packages available in the tap repository Homebrew/homebrew-science.

simulate-pcr 1.2 Predicts amplicon products from single or multiplex primers
siril 0.9.7 Astronomical image (pre-)processing application
sisl 4.6.0
skewer 0.2.2 Fast and accurate NGS adapter trimmer
slepc 3.7.4_1 Scalable Library for Eigenvalue Computations
slicot 5.0+20101122_3 Fortran 77 algorithms for computations in systems and control theory
sllib 1.4.5
smalt 0.7.6_1 Aligns DNA sequencing reads with a reference genome
smrtanalysis Analyze PacBio sequencing data
snap 2013-11-29 Gene prediction tool
snap-aligner 0.15
snid 5.0_5 Determine redshifts, type, and age of Type Ia supernovae
snoscan 0.9.1 Search for C/D box methylation guide snoRNA genes in a genomic sequence
snp-sites 2.3.2 Find SNP sites in a multi FASTA alignment file
snpeff 4.3p Genetic variant annotation and effect prediction toolbox
soapdenovo 2.04.r240_1 Next generation sequencing reads de novo assembler
sollya 6.0_2 Environment for the development of numerical codes
soplex 3.1.0 The Sequential object-oriented simPlex
sortmerna 2.1 SortMeRNA: filter metatranscriptomic ribosomal RNA
spaced 20160804_1 Spaced-Words for alignment-free sequence comparison
spatialite-gis 1.0.0c
spici 20130427 Fast local network clustering algorithm
squeezambler 2.0.3
ssake 3.8.4
sspace-longread 1-1
stacks 1.48 Pipeline for building loci from short-read sequences
stiff 2.4.0
stringtie 1.3.3b Transcript assembly and quantification for RNA-Seq
sumo 0.32.0 Simulation of Urban Mobility
superlu43 4.3_3 Solve large sparse nonsymmetric systems of equations