express

Streaming quantification for sequencing
http://bio.math.berkeley.edu/eXpress/

Current versions
1.5.1
HEAD

Revision: 9

express requires the following formulae to be installed:
bamtools 2.4.1_1 C++ API and command-line toolkit for BAM data
boost 1.65.1 Collection of portable C++ source libraries
cmake 3.9.4_1 Cross-platform make
protobuf 3.4.1 Protocol buffers (Google's data interchange format)
gperftools 2.6.1 Multi-threaded malloc() and performance analysis tools

Reverse dependencies

The following formula requires express to be installed:
trinity 2.4.0_2 RNA-Seq de novo assembler

Formula history

Michka Popoff express: revision for boost 1.65.1
Michka Popoff express: revision for boost
Tatyana Mozgacheva express: bump revision for boost
Tatyana Mozgacheva express: rebuild a bottle
Shaun Jackman express: Build bottles
ilovezfs express: revision for protobuf
Tim D. Smith express: bump for boost 1.60.0
Shaun Jackman express: add 1.5.1 bottle for Linuxbrew.
Shaun Jackman express: Fix for Linuxbrew
Shaun Jackman express: Disable bottle for Mac OS
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