express

Streaming quantification for sequencing
http://bio.math.berkeley.edu/eXpress/

Current versions
1.5.1
HEAD

Revision: 9

express requires the following formulae to be installed:
bamtools 2.4.1_1 C++ API and command-line toolkit for BAM data
boost 1.65.1 Collection of portable C++ source libraries
cmake 3.10.1 Cross-platform make
protobuf 3.5.0.1 Protocol buffers (Google's data interchange format)
gperftools 2.6.3 Multi-threaded malloc() and performance analysis tools

Reverse dependencies

The following formula requires express to be installed:
trinity 2.4.0_2 RNA-Seq de novo assembler

Recent formula history

Michka Popoff express: revision for boost 1.65.1
Michka Popoff express: revision for boost
Tatyana Mozgacheva express: bump revision for boost
Tatyana Mozgacheva express: rebuild a bottle
Shaun Jackman express: Build bottles

Formula code at GitHub