spades

SPAdes: de novo genome assembly
http://bioinf.spbau.ru/spades/

Current versions
3.11.0

spades requires the following formula to be installed:
cmake 3.9.4_1 Cross-platform make

Reverse dependencies

The following formulae require spades to be installed:
rampart 0.12.2 Configurable de novo assembly pipeline
unicycler 0.4.1 Hybrid assembly pipeline for bacterial genomes

Formula history

Shaun Jackman spades 3.11.0
ilovezfs spades: revision for gcc
ilovezfs spades 3.10.1
ilovezfs spades: put back the Linux bottle
ilovezfs spades: apply jemalloc fix for Sierra (#4624)
ilovezfs Revert "Use Ruby 1.9+ symbol hash keys in all formulae." (#4345)
JCount Use Ruby 1.9+ symbol hash keys in all formulae. (#4339)
ilovezfs spades: remove python patch
Mike McQuaid spades: remove :linked dependencies.
Shaun Jackman spades 3.9.0
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